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Emails reveal how health departments struggle to track human cases of bird flu

Two brown chickens sit next to one another.
Yves Logghe
/
AP
New rules set to take effect on January 1, 2023, govern how egg producers in Colorado house their birds.

Bird flu cases have more than doubled in the country within a few weeks, but researchers can鈥檛 determine why the spike is happening because surveillance for human infections has been patchy for seven months.

Just this week, California reported its in dairy workers and Washington state reported seven probable cases in poultry workers.

Hundreds of emails from state and local health departments, obtained in records requests from KFF Health News, help reveal why. Despite health officials鈥 arduous efforts to track human infections, surveillance is marred by delays, inconsistencies, and blind spots.

Several documents reflect a breakdown in communication with a subset of farm owners who don鈥檛 want themselves or their employees monitored for signs of bird flu.

For instance, a terse July 29 email from the Weld County Department of Public Health and Environment in Colorado said, 鈥淐urrently attempting to monitor 26 dairies. 9 have refused.鈥

A screenshot of an email with black and green font. It starts with "please see updated information below."
Screenshot by KFF Health News
A July 29 email reflects the absence of information when some farm owners don鈥檛 wish to correspond with public health departments about potential cases of bird flu, also called HPAI, for 鈥渉ighly pathogenic avian influenza.鈥 This email was obtained through Freedom of Information Act records requests from KFF Health News to the Weld County Department of Public Health and Environment in Colorado.

The email tallied the people on farms in the state who were supposed to be monitored: 鈥1250+ known workers plus an unknown amount exposed from dairies with whom we have not had contact or refused to provide information.鈥

Other emails hint that cases on dairy farms were missed. And an exchange between health officials in Michigan suggested that people connected to dairy farms had spread the bird flu virus to pet cats. But there hadn鈥檛 been enough testing to really know.

Researchers worldwide are increasingly concerned.

鈥淚 have been distressed and depressed by the lack of epidemiologic data and the lack of surveillance,鈥 said Nicole Lurie, formerly the assistant secretary for preparedness and response in the Obama administration.

Bird flu viruses have long been on the short list of pathogens with . Although they have been around for nearly three decades in birds, the unprecedented spread among U.S. dairy cattle this year is alarming: The viruses have evolved to thrive within mammals. Maria Van Kerkhove, head of the emerging diseases unit at the World Health Organization, said, 鈥淲e need to see more systemic, strategic testing of humans.鈥

Refusals and Delays

A key reason for spotty surveillance is that public health decisions largely lie with farm owners who have reported outbreaks among their cattle or poultry, according to emails, slide decks, and videos obtained by KFF Health News, and interviews with health officials in five states with outbreaks.

In a video of a small meeting at Central District Health in Boise, Idaho, an official warned colleagues that some dairies don鈥檛 want their names or locations disclosed to health departments. 鈥淥ur involvement becomes very sketchy in such places,鈥 she said.

鈥淚 just finished speaking to the owner of the dairy farm,鈥 wrote a public health nurse at the Mid-Michigan district health department in a May 10 email. 鈥淸REDACTED] feels that this may have started [REDACTED] weeks ago, that was the first time that they noticed a decrease in milk production,鈥 she wrote. 鈥淸REDACTED] does not feel that they need MSU Extension to come out,鈥 she added, referring to outreach to farmworkers provided by Michigan State University.

鈥淲e have had multiple dairies refuse a site visit,鈥 wrote the communicable disease program manager in Weld, Colorado, in a July 2 email.

Many farmers cooperated with health officials, but delays between their visits and when outbreaks started meant cases might have been missed. 鈥淭here were 4 people who discussed having symptoms,鈥 a Weld health official wrote in another email describing her visit to a farm with a bird flu outbreak, 鈥渂ut unfortunately all of them had either already passed the testing window, or did not want to be tested.鈥

Jason Chessher, who leads Weld鈥檚 public health department, said farmers often tell them not to visit because of time constraints.

Dairy operations require labor throughout the day, especially when cows are sick. Pausing work so employees can learn about the bird flu virus or go get tested could cut milk production and potentially harm animals needing attention. And if a bird flu test is positive, the farm owner loses labor for additional days and a worker might not get paid. Such realities complicate public health efforts, several health officials said.

An email from Weld鈥檚 health department, about a dairy owner in Colorado, reflected this idea: 鈥淧roducer refuses to send workers to Sunrise [clinic] to get tested since they鈥檙e too busy. He has pinkeye, too.鈥 Pink eye, or conjunctivitis, is a symptom of various infections, including the bird flu.

Chessher and other health officials told KFF Health News that instead of visiting farms, they often ask owners or supervisors to let them know if anyone on-site is ill. Or they may ask farm owners for a list of employee phone numbers to prompt workers to text the health department about any symptoms.

Jennifer Morse, medical director at the Mid-Michigan District Health Department, conceded that relying on owners raises the risk cases will be missed, but that being too pushy could reignite a backlash against public health. Some of the fiercest resistance against covid-19 measures, such as and , were in rural areas.

鈥淚t鈥檚 better to understand where they鈥檙e coming from and figure out the best way to work with them,鈥 she said. 鈥淏ecause if you try to work against them, it will not go well.鈥

Cat Clues

And then there were the pet cats. Unlike dozens of found dead on farms with outbreaks, these domestic cats didn鈥檛 roam around herds, lapping up milk that teemed with virus.

In emails, Mid-Michigan health officials hypothesized that the cats acquired the virus from droplets, known as fomites, on their owners鈥 hands or clothing. 鈥淚f we only could have gotten testing on the [REDACTED] household members, their clothing if possible, and their workplaces, we may have been able to prove human->fomite->cat transmission,鈥 said a July 22 email.

An email sent from a medical doctor with black font and a yellow header warning of suspicious email scams.
Screenshot by KFF Health News
A July 22 email suggests that people might have infected their domestic cats with the bird flu, also called HPAI, for 鈥渉ighly pathogenic avian influenza,鈥 but epidemiologists couldn鈥檛 determine how it happened because the animals鈥 owners had not been tested. This email was obtained through Freedom of Information Act records requests from KFF Health News to the Mid-Michigan District Health Department.

Her colleague suggested they publish a report on the cat cases 鈥渢o inform others about the potential for indirect transmission to companion animals.鈥

Thijs Kuiken, a bird flu researcher in the Netherlands, at the Erasmus Medical Center in Rotterdam, said person-to-cat infections wouldn鈥檛 be surprising since felines are so susceptible to the virus. Fomites may have been the cause or, he suggested, an infected 鈥 but untested 鈥 owner might have passed it on.

Hints of missed cases add to mounting . Health officials said they鈥檙e aware of the problem but that it鈥檚 not due only to farm owners鈥 objections.

Local health departments are chronically understaffed. For every 6,000 people in rural areas, there鈥檚 one public health nurse 鈥 who often works part-time, found.

鈥淪tate and local public health departments are decimated resource-wise,鈥 said Lurie, who is now an executive director at an international organization, the Coalition for Epidemic Preparedness Innovations. 鈥淵ou can鈥檛 expect them to do the job if you only resource them once there鈥檚 a crisis.鈥

Another explanation is a lack of urgency because the virus hasn鈥檛 severely harmed anyone in the country this year. 鈥淚f hundreds of workers had died, we鈥檇 be more forceful about monitoring workers,鈥 Chessher said. 鈥淏ut a handful of mild symptoms don鈥檛 warrant a heavy-handed response.鈥

All the bird flu cases among U.S. farmworkers have presented with conjunctivitis, a cough, a fever, and other flu-like symptoms that resolved without hospitalization. Yet infectious disease researchers note that numbers remain too low for conclusions 鈥 especially given the virus鈥檚 grim history.

About half of the diagnosed with the bird flu over three decades died. Viruses change over time, and many cases have probably gone undetected. But even if the true number of cases 鈥 the denominator 鈥 is five times as high, said Jennifer Nuzzo, director of the Pandemic Center at Brown University, a mortality rate of 10% would be devastating if the bird flu virus evolved to spread swiftly between people. The case fatality rate for covid was around 1%.

By missing cases, the public health system may be slow to notice if the virus becomes more contagious. Already, delays resulted in missing a potential instance of human-to-human transmission in early September. After a hospitalized patient tested positive for the bird flu virus in Missouri, public health officials learned that a person in the patient鈥檚 house had been sick 鈥 and recovered. It was too late to test for the virus, but on Oct. 24, the CDC announced that an analysis of the person鈥檚 blood found antibodies against the bird flu, signs of a prior infection.

CDC Principal Deputy Director Nirav Shah suggested the two people in Missouri had been separately infected, rather than passing the virus from one to the other. But without testing, it鈥檚 impossible to know for certain.

The possibility of a more contagious variant grows as flu season sets in. If someone contracts bird flu and seasonal flu at the same time, the two viruses could swap genes to form a hybrid that can spread swiftly. 鈥淲e need to take steps today to prevent the worst-case scenario,鈥 Nuzzo said.

The CDC can monitor farmworkers directly only at the request of state health officials. The agency is, however, tasked with providing a picture of what鈥檚 happening nationwide.

As of Oct. 24, the states that more than 5,100 people have been monitored nationally after exposure to sick animals; more than 260 tested; and 30 bird flu cases detected. (The dashboard hasn鈥檛 yet been updated to include the most recent cases and five of Washington鈥檚 reports pending CDC confirmation.)

Van Kerkhove and other pandemic experts said they were disturbed by the amount of detail the agency鈥檚 updates lack. Its dashboard doesn鈥檛 separate numbers by state, or break down how many people were monitored through visits with health officials, daily updates via text, or from a single call with a busy farm owner distracted as cows fall sick. It doesn鈥檛 say how many workers in each state were tested or the number of workers on farms that refused contact.

鈥淭hey don鈥檛 provide enough information and enough transparency about where these numbers are coming from,鈥 said Samuel Scarpino, an epidemiologist who specializes in disease surveillance. The number of detected bird flu cases doesn鈥檛 mean much without knowing the fraction it represents 鈥 the rate at which workers are being infected.

This is what renders California鈥檚 increase mysterious. Without a baseline, the state鈥檚 rapid uptick could signal it鈥檚 testing more aggressively than elsewhere. Alternatively, its upsurge might indicate that the virus has become more infectious 鈥 a very concerning, albeit less likely, development.

The CDC declined to comment on concerns about monitoring. On Oct. 4, Shah briefed journalists on California鈥檚 outbreak. The state identified cases because it was actively tracking farmworkers, he said. 鈥淭his is public health in action,鈥 he added.

Salvador Sandoval, a doctor and county health officer in Merced, California, did not exude such confidence. 鈥淢onitoring isn鈥檛 being done on a consistent basis,鈥 he said, as cases mounted in the region. 鈥淚t鈥檚 a really worrisome situation.鈥

KFF Health News regional editor Nathan Payne contributed to this report.